Package: itraxR 1.13.2

itraxR: Itrax Data Analysis Tools

Parse, trim, join, visualise and analyse data from Itrax sediment core multi-parameter scanners manufactured by Cox Analytical Systems, Sweden. Functions are provided for parsing XRF-peak area files, line-scan optical images, and radiographic images, alongside accompanying metadata. A variety of data wrangling tasks like trimming, joining and reducing XRF-peak area data are simplified. Multivariate methods are implemented with appropriate data transformation.

Authors:Thomas Bishop [aut, cre]

itraxR_1.13.2.tar.gz
itraxR_1.13.2.zip(r-4.7)itraxR_1.13.2.zip(r-4.6)itraxR_1.13.2.zip(r-4.5)
itraxR_1.13.2.tgz(r-4.6-any)itraxR_1.13.2.tgz(r-4.5-any)
itraxR_1.13.2.tar.gz(r-4.7-any)itraxR_1.13.2.tar.gz(r-4.6-any)
itraxR_1.13.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
itraxR/json (API)

# Install 'itraxR' in R:

install.packages('itraxR', repos = c('https://tombishop1.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tombishop1/itraxr/issues

Datasets:

CD166_19_S1 - Itrax core scanner data for core CD166_19_S1

On CRAN:

3.00 score 5 stars 4 scripts 669 downloads 14 exports 62 dependencies

Last updated from:9080b03300. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	154
source / vignettes	OK	184
linux-release-x86_64	OK	151
macos-release-arm64	OK	154
macos-oldrel-arm64	OK	211
windows-devel	OK	110
windows-release	OK	147
windows-oldrel	OK	115
wasm-release	OK	122

Exports:itrax_correlation itrax_image itrax_import itrax_join itrax_meta itrax_munsell itrax_ordination itrax_qspecsettings itrax_radiograph itrax_reduce itrax_restspectra itrax_section itrax_spectra itrax_sumspectra

Dependencies:backports bayesm bit bit64 broom cli clipr compositions cpp11 crayon DEoptimR dplyr farver generics ggcorrplot ggplot2 glue gtable hms isoband janitor labeling lifecycle logger lubridate magrittr MASS munsellinterpol pillar pkgconfig plyr prettyunits progress purrr R6 RColorBrewer Rcpp RcppArmadillo readr reshape2 rlang robustbase rootSolve S7 scales snakecase spacesRGB spacesXYZ stringi stringr tensorA tibble tidyr tidyselect tiff timechange tzdb utf8 vctrs viridisLite vroom withr

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Itrax core scanner data for core CD166_19_S1	CD166_19_S1
Calculate a correlation matrix for Itrax result data	itrax_correlation
Read an Itrax Image File	itrax_image
Import Itrax core-scanner result file	itrax_import
Join two or more Itrax result datasets	itrax_join
Parse Itrax scan metadata	itrax_meta
Convert an Itrax Image File into Munsell Colour	itrax_munsell
Principle Component Analysis on Itrax scan data	itrax_ordination
Read a Q-Spec settings file and parse the key-value pairs	itrax_qspecsettings
Read an Itrax Radiograph File	itrax_radiograph
Reduce Itrax XRF data	itrax_reduce
Make a spectrograph from raw Itrax data spectra files	itrax_restspectra
Cluster analysis and statistical grouping of Itrax data	itrax_section
Import an individual spectra file	itrax_spectra
Create arbitrary sumspectra files	itrax_sumspectra